A simple interface beween Amira and the neuronatomy toolbox (nat) — nat.amira-package • nat.amira

The main function is open_amira which will open a variety of R objects in the current running version of Amira. This works by writing a file to disk in a suitable AmiraMesh file format and then opening it. The following data types are supported:

Details

points
neurons (as single objects)
neuronlist objects containing many neurons
surface objects

Package options:

#'

nat.amira.amira The path to the Amira application (see amira_app_path and open_amira)

See also

Useful links:

https://github.com/jefferis/nat.amira
Report bugs at https://github.com/jefferis/nat.amira/issues