jknraw and jkn lists of Lateral Horn Neurons

Source: R/frulhns-data.r

These R lists contain 196 traced lateral horn neurons before (jknraw) and after (jkn) registration to the IS2 template brain. They lists are of superclass neuronlist for which numerous functions are defined in the AnalysisSuite package. The individual objects are of class neuron. Again there are a number of functions defined for plotting/analysis in AnalysisSuite.

Examples

library(nat)
#> Loading required package: rgl
#> Registered S3 method overwritten by 'nat':
#>   method             from
#>   as.mesh3d.ashape3d rgl 
#> 
#> Attaching package: ‘nat’
#> The following objects are masked from ‘package:base’:
#> 
#>     intersect, setdiff, union
plot(jkn,subset=cluster=='aSP-f' & shortGenotype=="JK1029",
  col=sex, WithNodes=F, main='aSP-f LHNs coloured by sex')
# NOT RUN {
plot3d(jkn[[1]])
plot3d(jkn[1:10],col='red')
plot3d(jkn[1:10],col=rainbow)
plot3d(jkn,subset=cluster=='aSP-f' & shortGenotype=="JK1029",
  col=sex, WithNodes=F)
# }